Publications

Julio González Díaz, Ignacio Palacios-Huerta, José M. Abuín (2021). Personal Bests and Gender. In The Review of Economics and Statistics.

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José M. Abuín, Nuno Lopes, Luís Ferreira, Tomás F. Pena, Bertil Schmidt (2020). Big Data in metagenomics: Apache Spark vs MPI. In PLoS ONE.

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Cesar Piñeiro, José M. Abuín, Juan C. Pichel (2020). VeryFastTree: speeding up the estimation of phylogenies for large alignments through parallelization and vectorization strategies. In Bioinformatics.

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Robin Kobus, José M. Abuín, André Müller, Sören Lukas Hellmann, Juan C. Pichel, Tomás F. Pena, Andreas Hildebrandt, Thomas Hankeln, Bertil Schmidt (2020). A Big Data Approach to Metagenomics for All-Food-Sequencing. In BMC Bioinformatics.

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Cesar Piñeiro, José M. Abuín, Juan C. Pichel (2017). Perldoop2: a Big Data-oriented source-to-source Perl-Java compiler. In IEE DataCom.

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José M. Abuín, Tomás F. Pena, Juan C. Pichel (2017). PASTASpark: multiple sequence alignment meets Big Data. In Bioinformatics.

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José M. Abuín, Juan C. Pichel, Tomás F. Pena, Jorge Amigo (2016). SparkBWA: Speeding Up the Alignment of High-Throughput DNA Sequencing Data. In Plos One.

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José M. Abuín, Juan C. Pichel, Tomás F. Pena, Jorge Amigo (2015). BigBWA: Approaching the Burrows-Wheeler Aligner to Big Data Technologies. In Bioinformatics.

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José M. Abuín, Juan C. Pichel, Tomás F. Pena, Pablo Gamallo, Marcos García (2014). Perldoop: Efficient Execution of Perl Scripts on Hadoop Clusters. In IEE Big Data.

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